MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus lentus
19428wC1_HT5
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 69
bases: 2,919,115 bps
CDS: 2,930
rRNA: 8
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 2,999
Total number of protein coding genes annotated/found:
2,930
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5035|JADGLE010000009.1
SEQF5035_02998
Genome Viewer
NA
AA
1893/631
96814-94922
hypothetical protein
SEQF5035|JADGLE010000009.1
SEQF5035_02997
Genome Viewer
NA
AA
1392/464
93375-94766
HTH-type transcriptional regulatory protein GabR
SEQF5035|JADGLE010000009.1
SEQF5035_02996
Genome Viewer
NA
AA
888/296
93267-92380
Pyridoxal 5'-phosphate synthase subunit PdxS
SEQF5035|JADGLE010000009.1
SEQF5035_02995
Genome Viewer
NA
AA
579/193
92378-91800
Pyridoxal 5'-phosphate synthase subunit PdxT
SEQF5035|JADGLE010000009.1
SEQF5035_02994
Genome Viewer
NA
AA
1221/407
90229-91449
Nucleoside permease NupC
SEQF5035|JADGLE010000009.1
SEQF5035_02993
Genome Viewer
NA
AA
462/154
90053-89592
Transcriptional regulator CtsR
SEQF5035|JADGLE010000009.1
SEQF5035_02992
Genome Viewer
NA
AA
537/179
89577-89041
Protein-arginine kinase activator protein
SEQF5035|JADGLE010000009.1
SEQF5035_02991
Genome Viewer
NA
AA
1008/336
89039-88032
Protein-arginine kinase
SEQF5035|JADGLE010000009.1
SEQF5035_02990
Genome Viewer
NA
AA
2466/822
88012-85547
ATP-dependent Clp protease ATP-binding subunit ClpC
SEQF5035|JADGLE010000009.1
SEQF5035_02989
Genome Viewer
NA
AA
1371/457
85391-84021
DNA repair protein RadA
SEQF5035|JADGLE010000009.1
SEQF5035_02988
Genome Viewer
NA
AA
1059/353
83999-82941
putative PIN and TRAM-domain containing protein YacL
SEQF5035|JADGLE010000009.1
SEQF5035_02987
Genome Viewer
NA
AA
687/229
82939-82253
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SEQF5035|JADGLE010000009.1
SEQF5035_02986
Genome Viewer
NA
AA
483/161
82263-81781
2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase
SEQF5035|JADGLE010000009.1
SEQF5035_02985
Genome Viewer
NA
AA
1458/486
81764-80307
Glutamate--tRNA ligase
SEQF5035|JADGLE010000009.1
SEQF5035_02984
Genome Viewer
NA
AA
642/214
80057-79416
Serine acetyltransferase
SEQF5035|JADGLE010000009.1
SEQF5035_02983
Genome Viewer
NA
AA
1404/468
79432-78029
Cysteine--tRNA ligase
SEQF5035|JADGLE010000009.1
SEQF5035_02982
Genome Viewer
NA
AA
411/137
78036-77626
Mini-ribonuclease 3
SEQF5035|JADGLE010000009.1
SEQF5035_02981
Genome Viewer
NA
AA
747/249
77633-76887
Putative TrmH family tRNA/rRNA methyltransferase
SEQF5035|JADGLE010000009.1
SEQF5035_02980
Genome Viewer
NA
AA
519/173
76887-76369
putative protein YacP
SEQF5035|JADGLE010000009.1
SEQF5035_02979
Genome Viewer
NA
AA
618/206
76289-75672
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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